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Research Ontologist

  • Research
  • Måløv

Data Integration & Ontologies, Global Research Technologies

Denmark – Måløv

Are you passionate about data and the relationship between concepts? Then, maybe you are the one we are looking for. The Data Integration & Ontologies department at Novo Nordisk is looking for a Research Ontologist with strong communication and leadership skills to support our data management initiative.

 

About the department

The newly established department of Data Integration & Ontologies aims at digitization of data from early research. With FAIR principles as the foundation, the department aims at simplifying the process of data capture using semantic models to establish interoperability across data sets from pre-clinical research. The long-term vision of the department is to create a digital mindset by driving the adoption of FAIR principles across the pipeline. This department plays a key role in the intersection between research scientists, application developers and data modelers. The team will act as a liaison among these groups to ensure the quality and consistency of data being generated while showcasing strong gains from analytics models using clean data.

 

As a Research Ontologist, you will have the exciting opportunity to drive the adoption of standardized vocabularies and ontologies thereby ensuring semantic interoperability across the early research pipeline.  

 

About the position

The Research Ontologist will be responsible for the creation/ updation of controlled vocabularies, taxonomies and ontologies for a specific domain with emphasis on sharing these across the company to maintain business standards for data. Since this data could be subject to regulatory guidelines, the incumbent is expected to collaborate across multiple functions to identify the best fit semantic models that suit the needs of the organisation. Job responsibilities include but are not limited to the following:

 

  • Develop customized ontologies/semantic models and standards by identifying and enriching existing public ontologies that suit the business needs using semantic web technologies
  • Interact with domain experts and data scientists to develop guidelines for ontology identification, enrichment and integration with existing systems.
  • Ensure data integrity and quality within the Ontology Management Systems after upgrades and patches.
  • Develop a review and governance system to enable easy request for ontology enrichment and or changes to suit the business needs.
  • Communicate the status of the ontology enrichment and integration along with milestones, key achievements and roadblocks if any with stakeholders and leadership on a regular basis.
  • Popularise the use of controlled vocabularies, ontologies and data management best practices through trainings and workshops.
     

Qualifications & Experience

You hold a PhD in life sciences or a related field, with some years post-PhD experience in semantic technologies, ontology engineering, ontology curation and data management. Knowledge of semantic web standards such as RDF, SKOS, OWL, OBO coupled with a solid understanding of Natural Language Processing, including NER, concept modelling, and entity resolution
 

The ideal candidate will have experience with:

  • Biomedical ontologies, vocabularies and taxonomies, such as MeSH, SNOMED, ICD9/10, MedDRA, CDISC etc. along with experience in validating and querying semantic models using SHACL/SPARQL
  • Terminology management and classification tools, such as Smartlogic – Semaphore, SciBite – CENtree, Semantic Web Company – PoolParty, Cambridge Semantics – Anzo, TopQuadrant – TopBraid etc
  • Knowledge of data format standards, including industry standards (e.g. XMI for interchange of XML), as well as database management systems (e.g. SQL Server, Oracle, NoSQL, MarkLogic)

 

Contact

For further information, please contact Saritha Vettikunnel Kuriakose +45 30 77 59 62

 

Deadline

February 20 2020

 

 

Millions rely on us
To work for Novo Nordisk you will need the skills, dedication and ambition to change lives for the better for millions of patients living with diabetes and other chronical diseases. In exchange, we offer the chance to be part of a truly global workplace, where passion and engagement are met with opportunities for professional and personal development.


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330167463Phoenix-8e7f30f612020-01-29T00:00:00Research Ontologist
  • Research
  • Måløv

Data Integration & Ontologies, Global Research Technologies

Denmark – Måløv

Are you passionate about data and the relationship between concepts? Then, maybe you are the one we are looking for. The Data Integration & Ontologies department at Novo Nordisk is looking for a Research Ontologist with strong communication and leadership skills to support our data management initiative.

 

About the department

The newly established department of Data Integration & Ontologies aims at digitization of data from early research. With FAIR principles as the foundation, the department aims at simplifying the process of data capture using semantic models to establish interoperability across data sets from pre-clinical research. The long-term vision of the department is to create a digital mindset by driving the adoption of FAIR principles across the pipeline. This department plays a key role in the intersection between research scientists, application developers and data modelers. The team will act as a liaison among these groups to ensure the quality and consistency of data being generated while showcasing strong gains from analytics models using clean data.

 

As a Research Ontologist, you will have the exciting opportunity to drive the adoption of standardized vocabularies and ontologies thereby ensuring semantic interoperability across the early research pipeline.  

 

About the position

The Research Ontologist will be responsible for the creation/ updation of controlled vocabularies, taxonomies and ontologies for a specific domain with emphasis on sharing these across the company to maintain business standards for data. Since this data could be subject to regulatory guidelines, the incumbent is expected to collaborate across multiple functions to identify the best fit semantic models that suit the needs of the organisation. Job responsibilities include but are not limited to the following:

 

  • Develop customized ontologies/semantic models and standards by identifying and enriching existing public ontologies that suit the business needs using semantic web technologies
  • Interact with domain experts and data scientists to develop guidelines for ontology identification, enrichment and integration with existing systems.
  • Ensure data integrity and quality within the Ontology Management Systems after upgrades and patches.
  • Develop a review and governance system to enable easy request for ontology enrichment and or changes to suit the business needs.
  • Communicate the status of the ontology enrichment and integration along with milestones, key achievements and roadblocks if any with stakeholders and leadership on a regular basis.
  • Popularise the use of controlled vocabularies, ontologies and data management best practices through trainings and workshops.
     

Qualifications & Experience

You hold a PhD in life sciences or a related field, with some years post-PhD experience in semantic technologies, ontology engineering, ontology curation and data management. Knowledge of semantic web standards such as RDF, SKOS, OWL, OBO coupled with a solid understanding of Natural Language Processing, including NER, concept modelling, and entity resolution
 

The ideal candidate will have experience with:

  • Biomedical ontologies, vocabularies and taxonomies, such as MeSH, SNOMED, ICD9/10, MedDRA, CDISC etc. along with experience in validating and querying semantic models using SHACL/SPARQL
  • Terminology management and classification tools, such as Smartlogic – Semaphore, SciBite – CENtree, Semantic Web Company – PoolParty, Cambridge Semantics – Anzo, TopQuadrant – TopBraid etc
  • Knowledge of data format standards, including industry standards (e.g. XMI for interchange of XML), as well as database management systems (e.g. SQL Server, Oracle, NoSQL, MarkLogic)

 

Contact

For further information, please contact Saritha Vettikunnel Kuriakose +45 30 77 59 62

 

Deadline

February 20 2020

 

 

Millions rely on us
To work for Novo Nordisk you will need the skills, dedication and ambition to change lives for the better for millions of patients living with diabetes and other chronical diseases. In exchange, we offer the chance to be part of a truly global workplace, where passion and engagement are met with opportunities for professional and personal development.

2020-02-17T20:51:06 Research Måløv Data Integration Ontologies, Global Research Technologies Denmark Måløv Are you passionate about data and the relationship between concepts? Then, maybe you are the one we are looking for. The Data Integration Ontologies department at Novo Nordisk is looking for a Research Ontologist with strong communication and leadership skills to support our data management initiative. About the department The newly established department of Data Integration Ontologies aims at digitization of data from early research. With FAIR principles as the foundation, the department aims at simplifying the process of data capture using semantic models to establish interoperability across data sets from pre-clinical research. The long-term vision of the department is to create a digital mindset by driving the adoption of FAIR principles across the pipeline. This department plays a key role in the intersection between research scientists, application developers and data modelers. The team will act as a liaison among these groups to ensure the quality and consistency of data being generated while showcasing strong gains from analytics models using clean data. As a Research Ontologist, you will have the exciting opportunity to drive the adoption of standardized vocabularies and ontologies thereby ensuring semantic interoperability across the early research pipeline. About the position The Research Ontologist will be responsible for the creation updation of controlled vocabularies, taxonomies and ontologies for a specific domain with emphasis on sharing these across the company to maintain business standards for data. Since this data could be subject to regulatory guidelines, the incumbent is expected to collaborate across multiple functions to identify the best fit semantic models that suit the needs of the organisation. Job responsibilities include but are not limited to the following: Develop customized ontologies semantic models and standards by identifying and enriching existing public ontologies that suit the business needs using semantic web technologies Interact with domain experts and data scientists to develop guidelines for ontology identification, enrichment and integration with existing systems. Ensure data integrity and quality within the Ontology Management Systems after upgrades and patches. Develop a review and governance system to enable easy request for ontology enrichment and or changes to suit the business needs. Communicate the status of the ontology enrichment and integration along with milestones, key achievements and roadblocks if any with stakeholders and leadership on a regular basis. Popularise the use of controlled vocabularies, ontologies and data management best practices through trainings and workshops. Qualifications Experience You hold a PhD in life sciences or a related field, with some years post-PhD experience in semantic technologies, ontology engineering, ontology curation and data management. Knowledge of semantic web standards such as RDF, SKOS, OWL, OBO coupled with a solid understanding of Natural Language Processing, including NER, concept modelling, and entity resolution The ideal candidate will have experience with: Biomedical ontologies, vocabularies and taxonomies, such as MeSH, SNOMED, ICD9 10, MedDRA, CDISC etc. along with experience in validating and querying semantic models using SHACL SPARQL Terminology management and classification tools, such as Smartlogic Semaphore, SciBite CENtree, Semantic Web Company PoolParty, Cambridge Semantics Anzo, TopQuadrant TopBraid etc Knowledge of data format standards, including industry standards (e.g. XMI for interchange of XML), as well as database management systems (e.g. SQL Server, Oracle, NoSQL, MarkLogic) Contact For further information, please contact Saritha Vettikunnel Kuriakose 45 30 77 59 62 Deadline February 20 2020 Millions rely on us To work for Novo Nordisk you will need the skills, dedication and ambition to change lives for the better for millions of patients living with diabetes and other chronical diseases. In exchange, we offer the chance to be part of a truly global workplace, where passion and engagement are met with opportunities for professional and personal development.11Jobnet8e7f30f6100000000000IDK_OFIR_02DKDanmark228DKK2020-02-20T00:00:000000https://www.novonordisk.com/careers/working-at-novo-nordisk/job-ad-display.30003.en_GB.html0EuropaDanmarkSjælland & øerStorkøbenhavnBallerup3701184Novo Nordisk A/S11Måløv Byvej 2002760MåløvDKDanmark0
DKDanmarkDKDanmark
8Fuldtid46Permanent10000894444JobNet5107730510773010029-01-2020000https://dispatcher.ofir.dk/statistic/register?context=FeedEntrySearchedCount&feedId=dc2beb84&entryId=8e7f30f6https://dispatcher.ofir.dk/statistic/register?context=FeedEntryDisplayCount&feedId=dc2beb84&entryId=8e7f30f6https://dispatcher.ofir.dk/statistic/register?context=JobApplicationInitiatedCount&feedId=dc2beb84&entryId=8e7f30f6&page=ShowJob&component=SendApplicationButtonhttps://dispatcher.ofir.dk/statistic/register?context=JobApplicationAppliedCount&feedId=dc2beb84&entryId=8e7f30f6&page=EmailApplyForm&component=SendApplicationButtonhttps://static.matchwork.com/company/logo/DK/ORS/SoMe/jobtitle/937872-246-1.jpgResearch Ontologist12008951Dansk3Læse/ tale937872Developer1IT364050367Sarithanoreply@ofir.comDKDanmarkDKDanmarkda-DK